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Hi Tomasz,<div><br></div><div>I set up a virtual machine for Manjaro 19 and was able to reproduce your error (which actually is not causing any issue on Ubuntu that I have been testing the codes on).</div><div><br></div><div>Will look into the issue and get back to you soon.</div><div><br></div><div><span style="font-size: 18.6667px">Cheers,</span></div><div><span style="font-size: 18.6667px">yuanpeng</span> </div><div><br></div><div class="mb_sig">--<div>Dr. Yuanpeng Zhang</div><div>Computational Instrument Scientist</div><div>Oak Ridge National Laboratory (ORNL)</div></div><blockquote class='history_container' type='cite' style='border-left-style:solid;border-width:1px; margin-top:20px; margin-left:0px;padding-left:10px;'>
<p style='color: #AAAAAA; margin-top: 10px;'>On 8/18/2020 5:08:08 AM, Stawski, Tomasz via rmcprofile-users <rmcprofile-users@shadow.nd.rl.ac.uk> wrote:</p><div style='font-family:Arial,Helvetica,sans-serif'>Dear all,
<br>
<br>I am trying to setup RMCprofile under the current version of Manjaro
<br>Linux, and it does not function. I can go through the regular set up
<br>processes without issues:
<br>
<br>input: ./RMCProfile_setup_no_term
<br>
<br>output: Welcome to RMCProfile version 6.7.7, please use this window to
<br>run the programs
<br>
<br>but when I move to the examples (the same terminal session of course) I
<br>am getting weird fortran errors (I think). I have up-to-date gcc
<br>fortran.
<br>
<br>Could somebody please help me out with this?
<br>
<br>Cheers,
<br>Tomasz
<br>
<br>
<br>Here is the listing:
<br>
<br>
<br>input: rmcprofile rmcsf6_190k
<br>
<br>output:
<br>
<br>Use CPU version
<br>
<br>---------------------------------------------------------------------
<br>-------
<br>
<br> RMCProfile version 6.7.7
<br> ==========================
<br>
<br>Version type: Version with molecular constraints and EXAFS
<br>Version date: May-18-2020
<br>Release notes: Robust XRAY implementation; automatic weights adjustment
<br>Using files: rmcsf6_190k
<br>
<br>---------------------------------------------------------------------
<br>-------
<br>
<br> THREADS_numbr = 8
<br> THREADS_id = 4
<br> THREADS_id = 1
<br> THREADS_id = 3
<br> THREADS_id = 6
<br> THREADS_id = 5
<br> THREADS_id = 0
<br> THREADS_id = 2
<br> THREADS_id = 7
<br>No XML/CML output requested
<br>Info> Read history file if present
<br> Reading configuration file rmcsf6_190k.his6f
<br>Info> ntypes,ni: 2
<br> 54 324
<br>Info> Elements in configuration:
<br>S
<br>F
<br>Info> Number of atom types = 2
<br>Info> Number of partials = 3
<br> Message> Check the 'MINIMUM_DISTANCES' section
<br> Message> in the '.dat' file if program stops here.
<br> Message> Check the 'MAXIMUM_MOVES' section
<br> Message> in the '.dat' file if program stops here.
<br> Sorry, no GPU_ACCELERATOR line in file
<br>Material: SF6
<br>Phase: BCC
<br>Sample temperature: 190K
<br>Investigator: Matt
<br>Info> Numbers of data sets (ngr, nsq, nfq) = 1 1 0
<br>Status> Calculating partial weighting coefficients.
<br> Message> Check the 'NEUTRON_COEFFICIENTS' section
<br> Message> in the '.dat' file if program stops here.
<br>Neutron r-space Info> Constant factor assumed to be 1.
<br>Neutron r-space Info> Assuming no renormalisation of neutron PDF data
<br>required
<br>Neutron r-space Info> RESOLUTION_CORRECTION assumed to be zero
<br> Neutron r-space Info> Flags for gudrun and stog file types: F F
<br>Info> Norm. exp. for neutron S(Q) file is assumed to be 0
<br>Neutron q-space Info> Constant scale assumed to be 1.
<br>Neutron q-space Info> Fitting offset of neutron scattering data
<br>required
<br>Neutron q-space Info> Assuming no renormalisation of neutron scattering
<br>data
<br>Neutron q-space Info> Number of points for S(Q) data set 1 is 1186
<br>Warning> Asked to read up to end_point 3000!
<br>Neutron q-space Info> Will read all 1186 data points.
<br>Neutron q-space Info> Allocated dimension of S(Q) arrays is 1186
<br>Info> sumsqcoeffs,sumiqcoeffs: 0.285588 0.275930
<br>Info> sumsqcoeffs,sumiqcoeffs: 0.285588 0.275930
<br>Info> Number of coordination constraints assumed to be zero
<br>Info> Number of average coordination number constraints assumed to be
<br>zero
<br>Bragg Dummy Info> No Bragg dummy data to be generated.
<br>Bragg Info> Will look up scattering lengths normally
<br>Bragg Info> Fitted no scale of Bragg data
<br> Info> No WEIGHTED_RESIDUAL line in file; traditional fit is assumed
<br>...
<br>Info> No FAST_BRAGG line in file; traditional fit is assumed ...
<br> Info> No EXTENDED_PEAK line in file
<br>Info> No magnetic scattering included
<br>
<br> No atom swap moves will be generated,
<br> atoms will only be translated.
<br>
<br> Since there is no ZMOVESCALE line ZMOVESCALE=1.0
<br> Made it to the start of rmca_main_code
<br> Random seed is 920.00000000000000
<br> about to call rmca_list
<br>
<br> Title of run: (Version 6f format configuration
<br>file)
<br>
<br> Configuration contains 378 atoms of 2 types
<br> Numbers of each type are:
<br> 54 324
<br>
<br> Configuration cell vectors are: 8.8302 0.0000 0.0000
<br> 0.0000 8.8315 0.0000
<br> 0.0000 0.0000 8.8315
<br>
<br> Number density is 0.068606 atoms per cubic Angstrom
<br>
<br> Cut offs in partial g(r)'s are at:
<br> 1-1 4.000 Angstrom
<br> 1-2 1.200 Angstrom
<br> 2-2 1.800 Angstrom
<br>
<br> Maximum change in any coordinate is 0.0500 A for particles of type 1
<br> Maximum change in any coordinate is 0.1000 A for particles of type 2
<br>
<br> Using 441 r points spaced at 0.020 A up to 8.820 A
<br>
<br> Writing summary every 100 generated moves
<br> Programme will run for 0.0 minutes saving every 0.0 minutes
<br>
<br> Fitting to 1 T(r)'s:
<br>
<br> Data set 1 uses points 1 to 1500 after subtraction of 0.000
<br> Standard deviation is 0.0500
<br> Coefficients of partials are:
<br> 0.00165 0.03942 0.23486
<br> Info> Faber-Ziman Coefficient = 0.27593000000000001
<br>
<br> Fitting to 1 S(Q)'s with constant coefficients
<br>
<br> Data set 1 uses points 1 to 1186 after subtraction of 0.000
<br> Standard deviation is 0.0100
<br> Coefficients of partials are:
<br> 0.00165 0.03942 0.23486
<br> Info> Faber-Ziman Coefficient = 0.27593000000000001
<br>
<br> There are 0 coordination constraints
<br>
<br> There are 0 coordination number constraints
<br> back from rmca_list
<br>
<br> Vectors
<br> 8.8301540000000003 0.0000000000000000 0.00000000000000
<br>00
<br> 0.0000000000000000 8.8315049999999999 0.00000000000000
<br>00
<br> 0.0000000000000000 0.0000000000000000 8.83150499999999
<br>99
<br> real space cell parameters of supercell
<br> 17.66031 17.66301 17.66301 90.00000 90.00000 90.
<br>00000
<br>
<br>Program received signal SIGILL: Illegal instruction.
<br>
<br>Backtrace for this error:
<br>#0 0x7f76dac732da in ???
<br>#1 0x7f76dac72503 in ???
<br>#2 0x7f76da29a3df in ???
<br>#3 0x7f76da95bba6 in ???
<br>#4 0x5643937103fd in __mod_bragg_MOD_calc_coord
<br> at ../main/rmcprofile_bragg.f90:1094
<br>#5 0x564393800698 in __mod_rmca_MOD_rmca_main_code
<br> at ../main/rmcprofile_rmca.f90:730
<br>#6 0x5643936c4bb7 in rmcprofile
<br> at ../main/rmcprofile.f90:1469
<br>#7 0x56439368f7ee in main
<br> at ../main/rmcprofile.f90:76
<br>Illegal instruction (core dumped)
<br>
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<br></div></blockquote>
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